Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015848572.1_cds_XP_016510454.1_23289
CDS Infomation

[gene=LOC107827768] [db_xref=GeneID:107827768] [protein=probable protein phosphatase 2C 52] [protein_id=XP_016510454.1] [location=complement(join(13725..14195,16283..16506,16590..16707,16797..17141,17221..17481))] [gbkey=CDS]
Sequence

ATGGGGGGTTGTGTCTCTACCAGTAGTCGGAGTAGTTGTAGTAGCAGGAGCAACGGAGAA
AGAGTTTCCCCTGAATGTTTGGGAATAAGGATGTTTACTCGAAAGAGGATTAGAAGAACT
TTTTCTGATCCTGTCACCACATTGCAACATTTGTCTTCAATACCTAATCGGATATTCAAA
AATGGAAAGAGCCGGACTTCTTGCATATTTACTCAACAGGGACGGAAAGGCATAAACCAG
GACGCCATGATTGTGTGGGAAGATTTCATGGCTGAAGATGTGACCTTTTGTGGGGTATTT
GATGGCCATGGTCCACATGGCCATCTTGTTGCTCGCAAAGTAAGGGATGCACTGCCGTTG
AAGCTATCATCATTTTTGCAATCATTTGACTCGAAACGTAATGGTGCTACTGCGAATTGC
TGCAATGGTAATCCAAAGTTGGATGTGGTGGATCCTGACAAGGATGGAGAGATGGAGGAT
AAAGTGGATAACTTGTGGAGAGAAGCTTTCCTTAAATCATACAAGGCCATGGATAAAGAA
CTAAGGTCCCACCCTAATTTAGATTGCTTTTGCAGTGGGAGCACGTCTGTTACTTTGGTG
AAACAGGGTTCAAATCTTTTTATGGGCTATATTGGTGATTCTCGGGCAATCTTGGCATCA
AAGGACAATAATGATTCAATGATAGCAGTTCAATTGACTGTTGATCTGAAGCCCGATTTA
CCAAAGGAAGCTGAGAGGATAAAACGATGTAAAGGTCGGGTTTTTGCATTGCAAGATGAG
CCTGAGGTGCAGAGAGTGTGGCTGCCATTTGACGATGCCCCTGGTTTAGCAATGGCTCGG
GCATTTGGGGATTTCTGCTTGAAGGAATATGGTGTGATTTCTGTTCCAGAGTTTTCTCAC
CATATTCTTACCGAAAGGGACAAGTTCATTGTTCTAGCATCTGATGGGGTTTGGGACGTC
TTGAGTAATGAGGAAGTGGTTGAGATAGTGTCATCAGCTCCTACACGAGCATCAGCTGCC
AGAATCCTGGTTGACTCAGCTGCACGCGAATGGAAAACCAAATATCCAACATCAAAGATG
GATGATTGTGCAGTTGTTTGTCTATTCTTGGACGGGAAAATGGACATTGAATCCGATAAC
GAGGATCAGTGTTTCTCTTCTGCCACACTACAGAGCAACCATTCTGGTAATGCTGTGGAA
TCAGACGATGGACAGAATTCCGAGCCATCTCTGCAGAGAAACTTTACTGTCAGATCAGCT
GAAGAGAACAGCGCGTACAAACGAATTATAGCAGAAGCAGACGCAAATCAAGAAACCGTG
GCAACTGAAGATCAGAACTGGTCAGGATTAGAAGGTGTCACTCGGGTAAACTCCCTGGTT
CAGCTTCCAAGATTTTCTGAAGAGAGGCCTAGACCCTGA

Peptide Sequence

PEP ID

XP_016510454.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 52 [Nicotiana tabacum]
Sequence

MGGCVSTSSRSSCSSRSNGERVSPECLGIRMFTRKRIRRTFSDPVTTLQHLSSIPNRIFK
NGKSRTSCIFTQQGRKGINQDAMIVWEDFMAEDVTFCGVFDGHGPHGHLVARKVRDALPL
KLSSFLQSFDSKRNGATANCCNGNPKLDVVDPDKDGEMEDKVDNLWREAFLKSYKAMDKE
LRSHPNLDCFCSGSTSVTLVKQGSNLFMGYIGDSRAILASKDNNDSMIAVQLTVDLKPDL
PKEAERIKRCKGRVFALQDEPEVQRVWLPFDDAPGLAMARAFGDFCLKEYGVISVPEFSH
HILTERDKFIVLASDGVWDVLSNEEVVEIVSSAPTRASAARILVDSAAREWKTKYPTSKM
DDCAVVCLFLDGKMDIESDNEDQCFSSATLQSNHSGNAVESDDGQNSEPSLQRNFTVRSA
EENSAYKRIIAEADANQETVATEDQNWSGLEGVTRVNSLVQLPRFSEERPRP

Transcript Sequence

Gene sequence data has not been registered.